- Biomedical signal/Image Processing
- Recording and analyzing EEG signals
- Neural Networks & Deep Learning
- Nonlinear (Chaotic) processing of Biomedical Signals
- Bioinstrumentation- Electrical Vagus Nerve Stimulation
- Faraji, Parham, and Mohammad Bagher Khodabakhshi. "CollectiveNet-AltSpec: A collective concurrent CNN architecture of alternate specifications for EEG media perception and emotion tracing aided by multi-domain feature-augmentation." Neural Networks 167 (2023): 502-516.
- Jamasb, Shahriar, Mohammad Bagher Khodabakhshi, and Rasool Baghbani. "A Subcircuit-Based Model for the Accumulation-Mode MOS Capacitor." Journal of Circuits, Systems and Computers 32.03 (2023): 2350054.
- Rad, Mohsen Kamelian, Meysam Hedayati Hamedani, and Mohammad Bagher Khodabakhshi. "Variations of the spontaneous electrical activities of the neuronal networks imposed by the exposure of electromagnetic radiations using computational map-based modeling." Journal of Computational Neuroscience 51.1 (2023): 187-200.
- Khodabakhshi, Mohammad Bagher, et al. "Cuffless blood pressure estimation using chaotic features of photoplethysmograms and parallel convolutional neural network." Computer Methods and Programs in Biomedicine 226 (2022): 107131.
- Malayeri, Ali Bahari, and Mohammad Bagher Khodabakhshi. "Concatenated convolutional neural network model for cuffless blood pressure estimation using fuzzy recurrence properties of photoplethysmogram signals." Scientific Reports 12.1 (2022): 6633.
- Khodabakhshi Mohammad Bagher, and Valiallah Saba. "A nonlinear dynamical approach to analysis of emotions using EEG signals based on the Poincaré map function and recurrence plots." Biomedical Engineering/Biomedizinische Technik (2020).
- Rad, Mohsen Kamelian, Meysam Hedayati Hamedani, and Mohammad Bagher Khodabakhshi. "Variations of the spontaneous electrical activities of the neuronal networks imposed by the exposure of electromagnetic radiations using computational map-based modeling." Journal of Computational Neuroscience (2022): 1-14.
- Sharifi Iman, Sobhan Goudarzi, and Mohammad Bagher Khodabakhshi. "A novel dynamical approach in continuous cuffless blood pressure estimation based on ECG and PPG signals." Artificial intelligence in medicine 97 (2019): 143-151.
- Sohrabi Faezeh, and Mohammad Bagher Khodabakhshi. "The trajectory intersection: An approach for nonlinear down-sampling." Chaos, Solitons & Fractals 124 (2019): 10-17.
- Khodabakhshi Mohammad Bagher, and Mohammad Hassan Moradi. "The attractor recurrent neural network based on fuzzy functions: An effective model for the classification of lung abnormalities." Computers in biology and medicine 84 (2017): 124-136
- Mahdevari, Satar, and Mohammad Bagher Khodabakhshi. "A hierarchical local-model tree for predicting roof displacement in longwall tailgates." Neural Computing and Applications (2021): 1-20.
- Mahdevari, Satar, and Mohammad Bagher Khodabakhshi. "A hybrid PSO-ANFIS model for predicting unstable zones in underground roadways." Tunnelling and Underground Space Technology 117 (2021): 104167.
- Baghbani, R., S. Jamasb, and M. B. Khodabakhshi. "A method for image edge detection based on interval-valued fuzzy sets." Journal of Intelligent & Fuzzy Systems 37.2 (2019): 2275-2288.
- Khodabakhshi, Mohammad Bagher, et al. "Lung sound decomposition using recurrent fuzzy wavelet network." Journal of Intelligent & Fuzzy Systems 33.4 (2017): 2497-2508.
- Goudarzi, Sobhan, Mohammad Bagher Khodabakhshi, and Mohammad Hassan Moradi. "Interactively recurrent fuzzy functions with multi objective learning and its application to chaotic time series prediction." Journal of Intelligent & Fuzzy Systems 30.2 (2016): 1157-1168.
- Neural Networks - Deep Learning, Hamedan University of Technology, 2020-present.
- Biological Signal Processing, Hamedan University of Technology, 2021-present.
- Fuzzy Systems, Hamedan University of Technology, 2021-present.
- Medical Instrumentation and General Medical Devices, Hamedan University of Technology, 2017-present.
- Signals and Systems, Hamedan University of Technology, 2018-present.
- Electronics II, Hamedan University of Technology, 2018-present.
- C Programmig, Hamedan University of Technology, 2017-present.
- Research Methods, Amirkabir University of Tecnology, 2016.
- Assistant Professor, Biomedical Engineering Department, Hamedan University of Technology, 2018-Present
- Head of BME unit, Sharif Technological Services Complex, ODMT office, odmt.sharif.edu, 2014-2017
- Head of Technical Department and Senior Technical Consultant, Kimia afiat company, kimia-afiat.com, 2010-2018
- Excellent Course Instructor Award, Hamedan University of Technology, Biomedical Engineering Department, April 2020.
- The Best Researcher Award, Hamedan University of Technology, Biomedical Engineering Department, December 2019.
- Excellent Course Instructor Award, Hamedan University of Technology, Biomedical Engineering Department, April 2019.
- Best Paper Award, 2017 Artificial Intelligence and Signal Processing Conference (AISP). IEEE, 2017.